Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Slc5a7Q8BGY9 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Slc5a7Q8BGY9 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc5a7Q8BGY9 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Slc5a7Q8BGY9 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.44□□□□□ -0.74
Slc5a7Q8BGY9 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Slc5a7Q8BGY9 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc5a7Q8BGY9 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc5a7Q8BGY9 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Gm12203-201ENSMUST00000118235 598 ntBASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Gm12209-201ENSMUST00000120089 596 ntBASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Slc5a7Q8BGY9 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Gm11803-201ENSMUST00000119966 444 ntBASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Gm37917-201ENSMUST00000194711 392 ntBASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms