Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trim50Q810I2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.65□□□□□ -0.54
Trim50Q810I2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 Gm13296-201ENSMUST00000117854 997 ntBASIC11.65□□□□□ -0.54
Trim50Q810I2 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.65□□□□□ -0.54
Trim50Q810I2 Gm15610-201ENSMUST00000120584 195 ntBASIC11.65□□□□□ -0.54
Trim50Q810I2 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim50Q810I2 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.65□□□□□ -0.54
Trim50Q810I2 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trim50Q810I2 Gm35960-201ENSMUST00000202712 767 ntBASIC11.65□□□□□ -0.54
Trim50Q810I2 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.65□□□□□ -0.54
Trim50Q810I2 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.65□□□□□ -0.54
Trim50Q810I2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.65□□□□□ -0.54
Trim50Q810I2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim50Q810I2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim50Q810I2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim50Q810I2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Trim50Q810I2 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trim50Q810I2 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.64□□□□□ -0.55
Trim50Q810I2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Trim50Q810I2 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trim50Q810I2 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.64□□□□□ -0.55
Trim50Q810I2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.64□□□□□ -0.55
Trim50Q810I2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 Gm26083-201ENSMUST00000157904 193 ntBASIC11.64□□□□□ -0.55
Trim50Q810I2 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trim50Q810I2 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim50Q810I2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Trim50Q810I2 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim50Q810I2 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.64□□□□□ -0.55
Trim50Q810I2 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.64□□□□□ -0.55
Trim50Q810I2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.64□□□□□ -0.55
Trim50Q810I2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim50Q810I2 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim50Q810I2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.63□□□□□ -0.55
Trim50Q810I2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim50Q810I2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Trim50Q810I2 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.63□□□□□ -0.55
Trim50Q810I2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trim50Q810I2 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trim50Q810I2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.63□□□□□ -0.55
Trim50Q810I2 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim50Q810I2 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trim50Q810I2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Trim50Q810I2 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.63□□□□□ -0.55
Trim50Q810I2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.63□□□□□ -0.55
Trim50Q810I2 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim50Q810I2 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.63□□□□□ -0.55
Trim50Q810I2 Gm9136-201ENSMUST00000193368 454 ntBASIC11.63□□□□□ -0.55
Trim50Q810I2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.63□□□□□ -0.55
Trim50Q810I2 Gm18893-201ENSMUST00000198416 943 ntBASIC11.63□□□□□ -0.55
Trim50Q810I2 Gm43962-201ENSMUST00000203898 190 ntBASIC11.63□□□□□ -0.55
Trim50Q810I2 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.63□□□□□ -0.55
Trim50Q810I2 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim50Q810I2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms