Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Gm12247-201ENSMUST00000117585 670 ntBASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Gm20414-201ENSMUST00000172918 646 ntBASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Gm9916-201ENSMUST00000192943 1228 ntBASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Gm42433-201ENSMUST00000196806 940 ntBASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Gm17825-201ENSMUST00000206836 794 ntBASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 BC106175-202ENSMUST00000219344 1213 ntBASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Gm40879-201ENSMUST00000220759 612 ntBASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trnp1Q80ZI1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Gm12179-201ENSMUST00000118344 1272 ntBASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Gm12036-201ENSMUST00000120008 530 ntBASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Gm25604-201ENSMUST00000158359 133 ntBASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trnp1Q80ZI1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Gm4294-201ENSMUST00000105169 614 ntBASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms