Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.16□□□□□ -0.62
Pif1Q80SX8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.15□□□□□ -0.62
Pif1Q80SX8 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.15□□□□□ -0.62
Pif1Q80SX8 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.15□□□□□ -0.62
Pif1Q80SX8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.15□□□□□ -0.62
Pif1Q80SX8 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Gm6754-201ENSMUST00000117124 913 ntBASIC11.15□□□□□ -0.62
Pif1Q80SX8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Gm4157-201ENSMUST00000211647 679 ntBASIC11.15□□□□□ -0.62
Pif1Q80SX8 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.15□□□□□ -0.62
Pif1Q80SX8 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.15□□□□□ -0.62
Pif1Q80SX8 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Pif1Q80SX8 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.15□□□□□ -0.62
Pif1Q80SX8 Ginm1-202ENSMUST00000065124 300 ntBASIC11.15□□□□□ -0.62
Pif1Q80SX8 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.15□□□□□ -0.62
Pif1Q80SX8 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pif1Q80SX8 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Pif1Q80SX8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.15□□□□□ -0.63
Pif1Q80SX8 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pif1Q80SX8 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Pif1Q80SX8 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pif1Q80SX8 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pif1Q80SX8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pif1Q80SX8 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
Pif1Q80SX8 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.15□□□□□ -0.63
Pif1Q80SX8 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.14□□□□□ -0.63
Pif1Q80SX8 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Gm8100-201ENSMUST00000182906 988 ntBASIC11.14□□□□□ -0.63
Pif1Q80SX8 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Gm43916-201ENSMUST00000205062 967 ntBASIC11.14□□□□□ -0.63
Pif1Q80SX8 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms