Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nphp3Q7TNH6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nphp3Q7TNH6 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nphp3Q7TNH6 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nphp3Q7TNH6 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.51□□□□□ -0.09
Nphp3Q7TNH6 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nphp3Q7TNH6 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Gm22902-201ENSMUST00000158488 302 ntBASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nphp3Q7TNH6 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Gm28686-201ENSMUST00000187404 609 ntBASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Gm43378-201ENSMUST00000199336 582 ntBASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Gm19287-201ENSMUST00000203190 358 ntBASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nphp3Q7TNH6 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Gm15595-201ENSMUST00000120840 961 ntBASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Gm13461-201ENSMUST00000120980 662 ntBASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Gm38117-201ENSMUST00000194653 939 ntBASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nphp3Q7TNH6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms