Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Gm11340-201ENSMUST00000119226 412 ntBASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Gm23771-201ENSMUST00000178702 110 ntBASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Gm4607-201ENSMUST00000206649 577 ntBASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox11Q7M6Y2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.15□□□□□ -0.47
Sox11Q7M6Y2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox11Q7M6Y2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Gm15595-201ENSMUST00000120840 961 ntBASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Gm13263-201ENSMUST00000121271 838 ntBASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Gm27530-201ENSMUST00000184096 98 ntBASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox11Q7M6Y2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Gm25880-201ENSMUST00000104331 132 ntBASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Gm15352-201ENSMUST00000118696 270 ntBASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Mir6998-201ENSMUST00000183343 64 ntBASIC12.13□□□□□ -0.47
Sox11Q7M6Y2 Gm27910-201ENSMUST00000185004 107 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms