Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx55Q6ZPL9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.56□□□□□ -0.24
Ddx55Q6ZPL9 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ddx55Q6ZPL9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx55Q6ZPL9 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx55Q6ZPL9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx55Q6ZPL9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx55Q6ZPL9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx55Q6ZPL9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx55Q6ZPL9 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Gm7504-201ENSMUST00000201449 424 ntBASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 AC140375.1-201ENSMUST00000225421 694 ntBASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Map1b-203ENSMUST00000223725 2669 ntBASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.55□□□□□ -0.24
Ddx55Q6ZPL9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Gm30671-201ENSMUST00000214898 318 ntBASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Gm10263-201ENSMUST00000085163 300 ntBASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms