Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rad54bQ6PFE3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rad54bQ6PFE3 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.02□□□□□ -0.48
Rad54bQ6PFE3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rad54bQ6PFE3 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rad54bQ6PFE3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rad54bQ6PFE3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Gm4986-201ENSMUST00000119731 549 ntBASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Gm13786-201ENSMUST00000122371 333 ntBASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
Rad54bQ6PFE3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Gm12015-201ENSMUST00000117065 843 ntBASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Gm11793-201ENSMUST00000120433 981 ntBASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Gm11960-201ENSMUST00000122068 925 ntBASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Gm9230-201ENSMUST00000188228 532 ntBASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rad54bQ6PFE3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rad54bQ6PFE3 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rad54bQ6PFE3 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rad54bQ6PFE3 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rad54bQ6PFE3 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rad54bQ6PFE3 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rad54bQ6PFE3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rad54bQ6PFE3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rad54bQ6PFE3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12□□□□□ -0.49
Rad54bQ6PFE3 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rad54bQ6PFE3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Rad54bQ6PFE3 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rad54bQ6PFE3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Rad54bQ6PFE3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12□□□□□ -0.49
Rad54bQ6PFE3 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms