Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.73□□□□□ -0.37
CtifQ6PEE2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.73□□□□□ -0.37
CtifQ6PEE2 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CtifQ6PEE2 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.73□□□□□ -0.37
CtifQ6PEE2 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.72□□□□□ -0.37
CtifQ6PEE2 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CtifQ6PEE2 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Gm9522-201ENSMUST00000182394 926 ntBASIC12.72□□□□□ -0.37
CtifQ6PEE2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.72□□□□□ -0.37
CtifQ6PEE2 Gm44397-201ENSMUST00000195950 113 ntBASIC12.72□□□□□ -0.37
CtifQ6PEE2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.72□□□□□ -0.37
CtifQ6PEE2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Gm6714-201ENSMUST00000218677 2330 ntBASIC12.72□□□□□ -0.37
CtifQ6PEE2 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CtifQ6PEE2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Gm10463-202ENSMUST00000195772 2889 ntBASIC12.71□□□□□ -0.37
CtifQ6PEE2 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC12.71□□□□□ -0.37
CtifQ6PEE2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Gm19165-201ENSMUST00000204453 1982 ntBASIC12.71□□□□□ -0.37
CtifQ6PEE2 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.71□□□□□ -0.37
CtifQ6PEE2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.71□□□□□ -0.37
CtifQ6PEE2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.71□□□□□ -0.37
CtifQ6PEE2 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CtifQ6PEE2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CtifQ6PEE2 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.71□□□□□ -0.38
CtifQ6PEE2 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CtifQ6PEE2 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CtifQ6PEE2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CtifQ6PEE2 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CtifQ6PEE2 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CtifQ6PEE2 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CtifQ6PEE2 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CtifQ6PEE2 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.71□□□□□ -0.38
CtifQ6PEE2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
CtifQ6PEE2 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CtifQ6PEE2 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CtifQ6PEE2 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CtifQ6PEE2 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CtifQ6PEE2 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CtifQ6PEE2 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CtifQ6PEE2 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CtifQ6PEE2 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms