Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Casc4Q6P2L7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms