Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Gm22018-201ENSMUST00000104357 131 ntBASIC10.05□□□□□ -0.8
SspnQ62147 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.05□□□□□ -0.8
SspnQ62147 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Gm13316-201ENSMUST00000140537 691 ntBASIC10.05□□□□□ -0.8
SspnQ62147 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.05□□□□□ -0.8
SspnQ62147 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
SspnQ62147 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.05□□□□□ -0.8
SspnQ62147 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Gm2546-201ENSMUST00000182630 991 ntBASIC10.05□□□□□ -0.8
SspnQ62147 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.05□□□□□ -0.8
SspnQ62147 Gm43133-201ENSMUST00000197472 463 ntBASIC10.05□□□□□ -0.8
SspnQ62147 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.05□□□□□ -0.8
SspnQ62147 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Gm26232-201ENSMUST00000083360 166 ntBASIC10.05□□□□□ -0.8
SspnQ62147 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.05□□□□□ -0.8
SspnQ62147 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
SspnQ62147 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
SspnQ62147 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.05□□□□□ -0.8
SspnQ62147 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.05□□□□□ -0.8
SspnQ62147 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SspnQ62147 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.04□□□□□ -0.8
SspnQ62147 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SspnQ62147 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SspnQ62147 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
SspnQ62147 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
SspnQ62147 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
SspnQ62147 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.04□□□□□ -0.8
SspnQ62147 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.04□□□□□ -0.8
SspnQ62147 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.04□□□□□ -0.8
SspnQ62147 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.04□□□□□ -0.8
SspnQ62147 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.04□□□□□ -0.8
SspnQ62147 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.04□□□□□ -0.8
SspnQ62147 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.04□□□□□ -0.8
SspnQ62147 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.04□□□□□ -0.8
SspnQ62147 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.04□□□□□ -0.8
SspnQ62147 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
SspnQ62147 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
SspnQ62147 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SspnQ62147 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SspnQ62147 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SspnQ62147 Gm17980-201ENSMUST00000217977 2349 ntBASIC10.04□□□□□ -0.8
SspnQ62147 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SspnQ62147 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SspnQ62147 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.04□□□□□ -0.8
SspnQ62147 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SspnQ62147 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SspnQ62147 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SspnQ62147 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SspnQ62147 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SspnQ62147 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SspnQ62147 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
SspnQ62147 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SspnQ62147 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SspnQ62147 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SspnQ62147 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms