Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.17□□□□□ -0.62
Sox17Q61473 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox17Q61473 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sox17Q61473 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.17□□□□□ -0.62
Sox17Q61473 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sox17Q61473 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sox17Q61473 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Gm11918-201ENSMUST00000121660 179 ntBASIC11.16□□□□□ -0.62
Sox17Q61473 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.16□□□□□ -0.62
Sox17Q61473 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.16□□□□□ -0.62
Sox17Q61473 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Mir6977-201ENSMUST00000184960 64 ntBASIC11.16□□□□□ -0.62
Sox17Q61473 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.16□□□□□ -0.62
Sox17Q61473 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.16□□□□□ -0.62
Sox17Q61473 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.16□□□□□ -0.62
Sox17Q61473 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sox17Q61473 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.16□□□□□ -0.62
Sox17Q61473 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox17Q61473 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.15□□□□□ -0.62
Sox17Q61473 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox17Q61473 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sox17Q61473 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.15□□□□□ -0.62
Sox17Q61473 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sox17Q61473 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sox17Q61473 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.15□□□□□ -0.62
Sox17Q61473 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox17Q61473 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sox17Q61473 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox17Q61473 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.15□□□□□ -0.62
Sox17Q61473 Gm14928-201ENSMUST00000120198 477 ntBASIC11.15□□□□□ -0.62
Sox17Q61473 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.15□□□□□ -0.62
Sox17Q61473 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sox17Q61473 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox17Q61473 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.15□□□□□ -0.62
Sox17Q61473 Gm24644-201ENSMUST00000157114 139 ntBASIC11.15□□□□□ -0.62
Sox17Q61473 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.15□□□□□ -0.62
Sox17Q61473 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.15□□□□□ -0.62
Sox17Q61473 Gm8738-201ENSMUST00000172606 329 ntBASIC11.15□□□□□ -0.62
Sox17Q61473 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.15□□□□□ -0.62
Sox17Q61473 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Gm17931-201ENSMUST00000208132 634 ntBASIC11.15□□□□□ -0.62
Sox17Q61473 Gm5781-201ENSMUST00000219792 443 ntBASIC11.15□□□□□ -0.62
Sox17Q61473 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sox17Q61473 Gm5356-201ENSMUST00000093326 615 ntBASIC11.15□□□□□ -0.62
Sox17Q61473 Gm8420-201ENSMUST00000097103 598 ntBASIC11.15□□□□□ -0.62
Sox17Q61473 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox17Q61473 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms