Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shroom1Q5SX79 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Gm14247-201ENSMUST00000120950 237 ntBASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Gm44882-201ENSMUST00000205702 802 ntBASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shroom1Q5SX79 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shroom1Q5SX79 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Shroom1Q5SX79 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Shroom1Q5SX79 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shroom1Q5SX79 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shroom1Q5SX79 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Shroom1Q5SX79 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shroom1Q5SX79 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shroom1Q5SX79 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.71□□□□□ -0.38
Shroom1Q5SX79 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shroom1Q5SX79 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Gm8199-201ENSMUST00000121323 823 ntBASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Gm12164-201ENSMUST00000121695 551 ntBASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Gm10774-201ENSMUST00000188689 204 ntBASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms