Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm24196-201ENSMUST00000179161 110 ntBASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm38114-201ENSMUST00000191877 1232 ntBASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm9136-201ENSMUST00000193368 454 ntBASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 AC162801.1-201ENSMUST00000220612 198 ntBASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 AC110817.1-201ENSMUST00000225706 605 ntBASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 AC125209.1-201ENSMUST00000225812 766 ntBASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm22058-201ENSMUST00000083393 310 ntBASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.27□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.27□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.27□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Gm7488-201ENSMUST00000117148 684 ntBASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms