Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdkl5Q3UTQ8 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdkl5Q3UTQ8 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cdkl5Q3UTQ8 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdkl5Q3UTQ8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.83□□□□□ -0.19
Cdkl5Q3UTQ8 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cdkl5Q3UTQ8 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cdkl5Q3UTQ8 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdkl5Q3UTQ8 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdkl5Q3UTQ8 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Cdkl5Q3UTQ8 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Cdkl5Q3UTQ8 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Gm25700-201ENSMUST00000177693 110 ntBASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkl5Q3UTQ8 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Gm22133-201ENSMUST00000102082 109 ntBASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Gm26286-201ENSMUST00000104166 134 ntBASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Gm17376-201ENSMUST00000166016 84 ntBASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cdkl5Q3UTQ8 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Gm11660-201ENSMUST00000120955 412 ntBASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Gm45224-201ENSMUST00000208203 414 ntBASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Gm6082-201ENSMUST00000215204 454 ntBASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.81□□□□□ -0.2
Cdkl5Q3UTQ8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms