Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Gm17040-202ENSMUST00000170597 889 ntBASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Mir7677-201ENSMUST00000184226 67 ntBASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Gm3332-201ENSMUST00000189337 928 ntBASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Gm15515-201ENSMUST00000117827 822 ntBASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Gm14441-201ENSMUST00000121960 540 ntBASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Gm9192-201ENSMUST00000183221 985 ntBASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Mir6927-201ENSMUST00000184494 71 ntBASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Gm807-202ENSMUST00000224929 408 ntBASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nlrc4Q3UP24 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Nlrc4Q3UP24 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.58□□□□□ -0.39
Nlrc4Q3UP24 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nlrc4Q3UP24 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Nlrc4Q3UP24 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nlrc4Q3UP24 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Gm4909-201ENSMUST00000118749 794 ntBASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Gm12266-201ENSMUST00000120311 962 ntBASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms