Protein–RNA interactions for Protein: Q3ULW6

Ccdc33, Coiled-coil domain-containing protein 33, mousemouse

Predictions only

Length 985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc33Q3ULW6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc33Q3ULW6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc33Q3ULW6 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc33Q3ULW6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc33Q3ULW6 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc33Q3ULW6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc33Q3ULW6 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc33Q3ULW6 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc33Q3ULW6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc33Q3ULW6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc33Q3ULW6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc33Q3ULW6 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc33Q3ULW6 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.48□□□□□ -0.25
Ccdc33Q3ULW6 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc33Q3ULW6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc33Q3ULW6 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc33Q3ULW6 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Gm11956-201ENSMUST00000119525 512 ntBASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Gm14585-201ENSMUST00000120713 634 ntBASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Gm8199-201ENSMUST00000121323 823 ntBASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Gm13182-201ENSMUST00000122241 312 ntBASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Gm22144-201ENSMUST00000157402 102 ntBASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Gm22138-201ENSMUST00000158748 128 ntBASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Mir7076-201ENSMUST00000183519 74 ntBASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Gm27910-201ENSMUST00000185004 107 ntBASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Gm2965-201ENSMUST00000198365 343 ntBASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc33Q3ULW6 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Gm11451-201ENSMUST00000118946 630 ntBASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Mir1901-201ENSMUST00000122616 78 ntBASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Gm23771-201ENSMUST00000178702 110 ntBASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Ccdc33Q3ULW6 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc33Q3ULW6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms