Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Q3KNL4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.73□□□□□ -0.53
Q3KNL4 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Q3KNL4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Q3KNL4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Q3KNL4 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Q3KNL4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.72□□□□□ -0.53
Q3KNL4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Q3KNL4 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Q3KNL4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.72□□□□□ -0.53
Q3KNL4 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.72□□□□□ -0.53
Q3KNL4 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Q3KNL4 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Q3KNL4 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Gm22018-201ENSMUST00000104357 131 ntBASIC11.72□□□□□ -0.53
Q3KNL4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.72□□□□□ -0.53
Q3KNL4 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Rprl1-201ENSMUST00000158050 327 ntBASIC11.72□□□□□ -0.53
Q3KNL4 Snora78-201ENSMUST00000158630 128 ntBASIC11.72□□□□□ -0.53
Q3KNL4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.72□□□□□ -0.53
Q3KNL4 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.72□□□□□ -0.53
Q3KNL4 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.72□□□□□ -0.53
Q3KNL4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Gm9996-201ENSMUST00000070359 913 ntBASIC11.72□□□□□ -0.53
Q3KNL4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Q3KNL4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Q3KNL4 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Q3KNL4 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Q3KNL4 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.72□□□□□ -0.53
Q3KNL4 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Q3KNL4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Q3KNL4 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3KNL4 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.71□□□□□ -0.53
Q3KNL4 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.71□□□□□ -0.53
Q3KNL4 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3KNL4 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.71□□□□□ -0.53
Q3KNL4 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3KNL4 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3KNL4 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Q3KNL4 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Q3KNL4 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3KNL4 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
Q3KNL4 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3KNL4 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.71□□□□□ -0.53
Q3KNL4 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
Q3KNL4 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Q3KNL4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Q3KNL4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Q3KNL4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.71□□□□□ -0.53
Q3KNL4 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.71□□□□□ -0.53
Q3KNL4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Q3KNL4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Q3KNL4 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.71□□□□□ -0.53
Q3KNL4 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Q3KNL4 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.71□□□□□ -0.53
Q3KNL4 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.71□□□□□ -0.53
Q3KNL4 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.71□□□□□ -0.53
Q3KNL4 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.71□□□□□ -0.53
Q3KNL4 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3KNL4 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms