Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm32072-201ENSMUST00000200803 1434 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Hmbox1-209ENSMUST00000176832 1586 ntTSL 5 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm44629-201ENSMUST00000206951 1840 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm14071-201ENSMUST00000117817 509 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm12133-201ENSMUST00000121775 661 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm6285-201ENSMUST00000122012 498 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm11686-201ENSMUST00000122397 333 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm25288-201ENSMUST00000122800 265 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm26532-201ENSMUST00000180630 690 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm38349-201ENSMUST00000195732 462 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Gm30238-201ENSMUST00000195528 2603 ntBASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Gm45504-201ENSMUST00000211407 2107 ntBASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Gm6189-201ENSMUST00000164487 2082 ntBASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Gm5432-201ENSMUST00000180759 1670 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Gm13347-201ENSMUST00000120298 1353 ntBASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Gm14650-201ENSMUST00000120400 889 ntBASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 D530037P16Rik-201ENSMUST00000199255 1027 ntBASIC6.09□□□□□ -1.43
Ush2AQ2QI47 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Olfr649-201ENSMUST00000060440 939 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Gm38034-201ENSMUST00000193915 2069 ntBASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Gm8806-201ENSMUST00000120076 1407 ntBASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Gm26021-201ENSMUST00000158664 131 ntBASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC6.09□□□□□ -1.43
Ush2AQ2QI47 AC139155.1-201ENSMUST00000226043 444 ntBASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Tssk4-204ENSMUST00000226591 1243 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Gm9796-201ENSMUST00000062249 2250 ntBASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms