Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Pkd1l3Q2EG98 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1l3Q2EG98 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.73□□□□□ -0.69
Pkd1l3Q2EG98 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Gm22711-201ENSMUST00000116890 133 ntBASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Gm9211-201ENSMUST00000182882 975 ntBASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Gm4726-201ENSMUST00000135604 736 ntBASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Gm6019-201ENSMUST00000148369 736 ntBASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Gm43916-201ENSMUST00000205062 967 ntBASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1l3Q2EG98 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Gm7851-201ENSMUST00000117574 323 ntBASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Gm22144-201ENSMUST00000157402 102 ntBASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.71□□□□□ -0.69
Pkd1l3Q2EG98 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Pkd1l3Q2EG98 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pkd1l3Q2EG98 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Pkd1l3Q2EG98 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Pkd1l3Q2EG98 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pkd1l3Q2EG98 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pkd1l3Q2EG98 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Pkd1l3Q2EG98 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms