Protein–RNA interactions for Protein: Q0GGX2

Znf541, Zinc finger protein 541, mousemouse

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf541Q0GGX2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Znf541Q0GGX2 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Znf541Q0GGX2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Znf541Q0GGX2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.01□□□□□ -0.01
Znf541Q0GGX2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC15.01□□□□□ -0.01
Znf541Q0GGX2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Znf541Q0GGX2 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Znf541Q0GGX2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Znf541Q0GGX2 Gm28424-201ENSMUST00000187393 1319 ntBASIC15.01□□□□□ -0.01
Znf541Q0GGX2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Znf541Q0GGX2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC15.01□□□□□ -0.01
Znf541Q0GGX2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Znf541Q0GGX2 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Znf541Q0GGX2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Znf541Q0GGX2 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Znf541Q0GGX2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Znf541Q0GGX2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC15□□□□□ -0.01
Znf541Q0GGX2 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Znf541Q0GGX2 Gm29067-201ENSMUST00000190821 470 ntBASIC15□□□□□ -0.01
Znf541Q0GGX2 Gm44421-201ENSMUST00000205064 1221 ntBASIC15□□□□□ -0.01
Znf541Q0GGX2 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC15□□□□□ -0.01
Znf541Q0GGX2 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC15□□□□□ -0.01
Znf541Q0GGX2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC15□□□□□ -0.01
Znf541Q0GGX2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Znf541Q0GGX2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC15□□□□□ -0.01
Znf541Q0GGX2 Gm18806-201ENSMUST00000207607 1775 ntBASIC15□□□□□ -0.01
Znf541Q0GGX2 AC166836.1-201ENSMUST00000219933 1795 ntBASIC15□□□□□ -0.01
Znf541Q0GGX2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Znf541Q0GGX2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Znf541Q0GGX2 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Znf541Q0GGX2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Znf541Q0GGX2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Znf541Q0GGX2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15□□□□□ -0.01
Znf541Q0GGX2 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Znf541Q0GGX2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Gm13611-201ENSMUST00000118269 318 ntBASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Gm15615-201ENSMUST00000118876 198 ntBASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.99□□□□□ -0.01
Znf541Q0GGX2 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Gm9550-201ENSMUST00000161130 862 ntBASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 AC122350.1-201ENSMUST00000228135 533 ntBASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Znf541Q0GGX2 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Znf541Q0GGX2 Gm14942-201ENSMUST00000119642 336 ntBASIC14.98□□□□□ -0.01
Znf541Q0GGX2 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC14.98□□□□□ -0.01
Znf541Q0GGX2 Gm14585-201ENSMUST00000120713 634 ntBASIC14.98□□□□□ -0.01
Znf541Q0GGX2 Gm11246-201ENSMUST00000120880 345 ntBASIC14.98□□□□□ -0.01
Znf541Q0GGX2 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Znf541Q0GGX2 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Znf541Q0GGX2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 129.4 ms