Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.15□□□□□ -0.46
Ebf1Q07802 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ebf1Q07802 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.15□□□□□ -0.46
Ebf1Q07802 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.15□□□□□ -0.46
Ebf1Q07802 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.15□□□□□ -0.46
Ebf1Q07802 Mir7686-201ENSMUST00000200604 57 ntBASIC12.15□□□□□ -0.46
Ebf1Q07802 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.15□□□□□ -0.46
Ebf1Q07802 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Gm45398-201ENSMUST00000210561 165 ntBASIC12.15□□□□□ -0.46
Ebf1Q07802 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.15□□□□□ -0.46
Ebf1Q07802 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.15□□□□□ -0.46
Ebf1Q07802 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.15□□□□□ -0.46
Ebf1Q07802 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.15□□□□□ -0.46
Ebf1Q07802 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ebf1Q07802 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Ebf1Q07802 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Ebf1Q07802 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.15□□□□□ -0.47
Ebf1Q07802 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Ebf1Q07802 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ebf1Q07802 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Gm12857-201ENSMUST00000117678 592 ntBASIC12.14□□□□□ -0.47
Ebf1Q07802 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Gm14760-201ENSMUST00000121831 999 ntBASIC12.14□□□□□ -0.47
Ebf1Q07802 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.14□□□□□ -0.47
Ebf1Q07802 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.14□□□□□ -0.47
Ebf1Q07802 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Gm9358-201ENSMUST00000183067 927 ntBASIC12.14□□□□□ -0.47
Ebf1Q07802 Gm27530-201ENSMUST00000184096 98 ntBASIC12.14□□□□□ -0.47
Ebf1Q07802 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Gm7593-201ENSMUST00000187246 644 ntBASIC12.14□□□□□ -0.47
Ebf1Q07802 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.14□□□□□ -0.47
Ebf1Q07802 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.14□□□□□ -0.47
Ebf1Q07802 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.14□□□□□ -0.47
Ebf1Q07802 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.14□□□□□ -0.47
Ebf1Q07802 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf1Q07802 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ebf1Q07802 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ebf1Q07802 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ebf1Q07802 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.13□□□□□ -0.47
Ebf1Q07802 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Ebf1Q07802 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.13□□□□□ -0.47
Ebf1Q07802 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms