Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.03□□□□□ -0.48
Pfdn6Q03958 Gm11930-201ENSMUST00000117788 190 ntBASIC12.03□□□□□ -0.48
Pfdn6Q03958 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Gm2991-201ENSMUST00000173338 480 ntBASIC12.03□□□□□ -0.48
Pfdn6Q03958 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.03□□□□□ -0.48
Pfdn6Q03958 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pfdn6Q03958 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.03□□□□□ -0.48
Pfdn6Q03958 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pfdn6Q03958 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Pfdn6Q03958 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Pfdn6Q03958 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pfdn6Q03958 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Pfdn6Q03958 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.02□□□□□ -0.49
Pfdn6Q03958 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Gm27046-201ENSMUST00000182160 463 ntBASIC12.02□□□□□ -0.49
Pfdn6Q03958 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.02□□□□□ -0.49
Pfdn6Q03958 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.02□□□□□ -0.49
Pfdn6Q03958 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn6Q03958 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.01□□□□□ -0.49
Pfdn6Q03958 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms