Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm25668-201ENSMUST00000157700 129 ntBASIC12.17□□□□□ -0.46
Thumpd3P97770 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.17□□□□□ -0.46
Thumpd3P97770 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Thumpd3P97770 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.17□□□□□ -0.46
Thumpd3P97770 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.17□□□□□ -0.46
Thumpd3P97770 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Thumpd3P97770 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Thumpd3P97770 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Thumpd3P97770 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.17□□□□□ -0.46
Thumpd3P97770 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Thumpd3P97770 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Thumpd3P97770 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Thumpd3P97770 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Thumpd3P97770 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Thumpd3P97770 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Thumpd3P97770 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Thumpd3P97770 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Thumpd3P97770 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Thumpd3P97770 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Thumpd3P97770 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Thumpd3P97770 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Thumpd3P97770 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.16□□□□□ -0.46
Thumpd3P97770 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Thumpd3P97770 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Thumpd3P97770 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.16□□□□□ -0.46
Thumpd3P97770 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Thumpd3P97770 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Thumpd3P97770 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.16□□□□□ -0.46
Thumpd3P97770 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.16□□□□□ -0.46
Thumpd3P97770 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Gm26956-201ENSMUST00000182176 986 ntBASIC12.16□□□□□ -0.46
Thumpd3P97770 Gm18304-201ENSMUST00000189162 546 ntBASIC12.16□□□□□ -0.46
Thumpd3P97770 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.16□□□□□ -0.46
Thumpd3P97770 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Thumpd3P97770 Mir433-201ENSMUST00000093564 124 ntBASIC12.16□□□□□ -0.46
Thumpd3P97770 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.16□□□□□ -0.46
Thumpd3P97770 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Thumpd3P97770 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.16□□□□□ -0.46
Thumpd3P97770 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Thumpd3P97770 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.16□□□□□ -0.46
Thumpd3P97770 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Thumpd3P97770 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.15□□□□□ -0.46
Thumpd3P97770 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.15□□□□□ -0.46
Thumpd3P97770 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.15□□□□□ -0.46
Thumpd3P97770 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.15□□□□□ -0.46
Thumpd3P97770 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.15□□□□□ -0.46
Thumpd3P97770 Gm29199-201ENSMUST00000187766 775 ntBASIC12.15□□□□□ -0.46
Thumpd3P97770 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.15□□□□□ -0.46
Thumpd3P97770 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.15□□□□□ -0.46
Thumpd3P97770 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.15□□□□□ -0.46
Thumpd3P97770 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.15□□□□□ -0.46
Thumpd3P97770 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.15□□□□□ -0.46
Thumpd3P97770 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.15□□□□□ -0.46
Thumpd3P97770 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Thumpd3P97770 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.15□□□□□ -0.46
Thumpd3P97770 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.15□□□□□ -0.46
Thumpd3P97770 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms