Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.87□□□□□ -0.83
Usp9xP70398 Ighv1-2-201ENSMUST00000195325 378 ntBASIC9.87□□□□□ -0.83
Usp9xP70398 Gm43249-201ENSMUST00000200464 458 ntBASIC9.87□□□□□ -0.83
Usp9xP70398 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC9.87□□□□□ -0.83
Usp9xP70398 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC9.87□□□□□ -0.83
Usp9xP70398 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC9.87□□□□□ -0.83
Usp9xP70398 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Ksr1-207ENSMUST00000226282 5260 ntBASIC9.87□□□□□ -0.83
Usp9xP70398 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC9.87□□□□□ -0.83
Usp9xP70398 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
Usp9xP70398 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.87□□□□□ -0.83
Usp9xP70398 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
Usp9xP70398 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC9.87□□□□□ -0.83
Usp9xP70398 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Usp9xP70398 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Usp9xP70398 Gm26982-201ENSMUST00000182250 1151 ntBASIC9.87□□□□□ -0.83
Usp9xP70398 Gm43671-201ENSMUST00000200422 433 ntBASIC9.87□□□□□ -0.83
Usp9xP70398 Gm9204-201ENSMUST00000212641 947 ntBASIC9.87□□□□□ -0.83
Usp9xP70398 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC9.87□□□□□ -0.83
Usp9xP70398 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.87□□□□□ -0.83
Usp9xP70398 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Usp9xP70398 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Gm43858-201ENSMUST00000199418 1778 ntBASIC9.87□□□□□ -0.83
Usp9xP70398 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp9xP70398 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Usp9xP70398 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC9.86□□□□□ -0.83
Usp9xP70398 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Usp9xP70398 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Gm24279-201ENSMUST00000104236 131 ntBASIC9.86□□□□□ -0.83
Usp9xP70398 Gm9673-201ENSMUST00000119287 781 ntBASIC9.86□□□□□ -0.83
Usp9xP70398 Gm15196-201ENSMUST00000121406 482 ntBASIC9.86□□□□□ -0.83
Usp9xP70398 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Usp9xP70398 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 AC162932.1-201ENSMUST00000219209 872 ntBASIC9.86□□□□□ -0.83
Usp9xP70398 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Usp9xP70398 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Usp9xP70398 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Usp9xP70398 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.86□□□□□ -0.83
Usp9xP70398 AC154262.2-201ENSMUST00000224310 2293 ntBASIC9.86□□□□□ -0.83
Usp9xP70398 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Usp9xP70398 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC9.86□□□□□ -0.83
Usp9xP70398 Gm20694-201ENSMUST00000176943 404 ntBASIC9.86□□□□□ -0.83
Usp9xP70398 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC9.86□□□□□ -0.83
Usp9xP70398 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC9.86□□□□□ -0.83
Usp9xP70398 Gm10263-201ENSMUST00000085163 300 ntBASIC9.86□□□□□ -0.83
Usp9xP70398 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC9.86□□□□□ -0.83
Usp9xP70398 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC9.86□□□□□ -0.83
Usp9xP70398 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Usp9xP70398 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Usp9xP70398 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp9xP70398 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms