Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad50P70388 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad50P70388 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rad50P70388 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rad50P70388 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad50P70388 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad50P70388 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rad50P70388 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.35□□□□□ -0.11
Rad50P70388 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad50P70388 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad50P70388 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad50P70388 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad50P70388 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad50P70388 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rad50P70388 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rad50P70388 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.35□□□□□ -0.11
Rad50P70388 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rad50P70388 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rad50P70388 Gm27627-201ENSMUST00000183644 150 ntBASIC14.35□□□□□ -0.11
Rad50P70388 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.35□□□□□ -0.11
Rad50P70388 Gm18893-201ENSMUST00000198416 943 ntBASIC14.35□□□□□ -0.11
Rad50P70388 Gm43947-201ENSMUST00000203019 959 ntBASIC14.35□□□□□ -0.11
Rad50P70388 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad50P70388 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad50P70388 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rad50P70388 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad50P70388 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rad50P70388 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rad50P70388 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.34□□□□□ -0.11
Rad50P70388 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.34□□□□□ -0.11
Rad50P70388 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.34□□□□□ -0.11
Rad50P70388 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.34□□□□□ -0.11
Rad50P70388 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.34□□□□□ -0.11
Rad50P70388 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Cog3-203ENSMUST00000227473 4197 ntBASIC14.34□□□□□ -0.11
Rad50P70388 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.34□□□□□ -0.11
Rad50P70388 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad50P70388 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rad50P70388 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rad50P70388 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Rad50P70388 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Rad50P70388 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rad50P70388 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.33□□□□□ -0.11
Rad50P70388 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rad50P70388 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
Rad50P70388 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rad50P70388 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rad50P70388 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rad50P70388 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rad50P70388 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rad50P70388 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rad50P70388 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rad50P70388 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rad50P70388 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rad50P70388 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rad50P70388 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rad50P70388 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rad50P70388 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.33□□□□□ -0.12
Rad50P70388 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rad50P70388 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.33□□□□□ -0.12
Rad50P70388 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rad50P70388 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.33□□□□□ -0.12
Rad50P70388 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.33□□□□□ -0.12
Rad50P70388 AY036118-201ENSMUST00000200021 923 ntBASIC14.33□□□□□ -0.12
Rad50P70388 Gm8959-201ENSMUST00000213150 571 ntBASIC14.33□□□□□ -0.12
Rad50P70388 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rad50P70388 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rad50P70388 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rad50P70388 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rad50P70388 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Rad50P70388 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rad50P70388 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rad50P70388 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rad50P70388 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rad50P70388 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Rad50P70388 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms