Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.19□□□□□ -0.62
Six5P70178 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.19□□□□□ -0.62
Six5P70178 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Six5P70178 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.19□□□□□ -0.62
Six5P70178 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.19□□□□□ -0.62
Six5P70178 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.19□□□□□ -0.62
Six5P70178 Gm5616-201ENSMUST00000165252 384 ntBASIC11.19□□□□□ -0.62
Six5P70178 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Gm8741-201ENSMUST00000174736 384 ntBASIC11.19□□□□□ -0.62
Six5P70178 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Six5P70178 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.19□□□□□ -0.62
Six5P70178 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Six5P70178 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Six5P70178 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.19□□□□□ -0.62
Six5P70178 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Six5P70178 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Six5P70178 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.19□□□□□ -0.62
Six5P70178 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.19□□□□□ -0.62
Six5P70178 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Six5P70178 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Six5P70178 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.18□□□□□ -0.62
Six5P70178 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Six5P70178 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Six5P70178 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.18□□□□□ -0.62
Six5P70178 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.18□□□□□ -0.62
Six5P70178 Gm6114-201ENSMUST00000182472 968 ntBASIC11.18□□□□□ -0.62
Six5P70178 Mir6420-201ENSMUST00000185032 102 ntBASIC11.18□□□□□ -0.62
Six5P70178 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Gm17812-201ENSMUST00000204935 318 ntBASIC11.18□□□□□ -0.62
Six5P70178 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.18□□□□□ -0.62
Six5P70178 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.18□□□□□ -0.62
Six5P70178 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.18□□□□□ -0.62
Six5P70178 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Six5P70178 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Six5P70178 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.18□□□□□ -0.62
Six5P70178 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.18□□□□□ -0.62
Six5P70178 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Six5P70178 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.17□□□□□ -0.62
Six5P70178 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Six5P70178 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Six5P70178 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.17□□□□□ -0.62
Six5P70178 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms