Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Crnkl1P63154 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Crnkl1P63154 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Crnkl1P63154 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Crnkl1P63154 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Crnkl1P63154 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Crnkl1P63154 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Crnkl1P63154 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.83□□□□□ -0.52
Crnkl1P63154 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.83□□□□□ -0.52
Crnkl1P63154 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Rgr-203ENSMUST00000225070 4704 ntBASIC11.83□□□□□ -0.52
Crnkl1P63154 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Crnkl1P63154 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Crnkl1P63154 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Gm13369-201ENSMUST00000119442 987 ntBASIC11.83□□□□□ -0.52
Crnkl1P63154 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Gm29127-201ENSMUST00000188304 517 ntBASIC11.83□□□□□ -0.52
Crnkl1P63154 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.83□□□□□ -0.52
Crnkl1P63154 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.83□□□□□ -0.52
Crnkl1P63154 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.83□□□□□ -0.52
Crnkl1P63154 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.83□□□□□ -0.52
Crnkl1P63154 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.83□□□□□ -0.52
Crnkl1P63154 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.83□□□□□ -0.52
Crnkl1P63154 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.83□□□□□ -0.52
Crnkl1P63154 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.83□□□□□ -0.52
Crnkl1P63154 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.83□□□□□ -0.52
Crnkl1P63154 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Crnkl1P63154 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.83□□□□□ -0.52
Crnkl1P63154 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.83□□□□□ -0.52
Crnkl1P63154 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.83□□□□□ -0.52
Crnkl1P63154 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.83□□□□□ -0.52
Crnkl1P63154 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Crnkl1P63154 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Crnkl1P63154 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.82□□□□□ -0.52
Crnkl1P63154 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.82□□□□□ -0.52
Crnkl1P63154 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Crnkl1P63154 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Crnkl1P63154 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.82□□□□□ -0.52
Crnkl1P63154 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Crnkl1P63154 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Crnkl1P63154 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.82□□□□□ -0.52
Crnkl1P63154 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.82□□□□□ -0.52
Crnkl1P63154 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Crnkl1P63154 Gm24231-201ENSMUST00000104315 133 ntBASIC11.82□□□□□ -0.52
Crnkl1P63154 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Crnkl1P63154 Mir1982-201ENSMUST00000157368 74 ntBASIC11.82□□□□□ -0.52
Crnkl1P63154 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.82□□□□□ -0.52
Crnkl1P63154 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.82□□□□□ -0.52
Crnkl1P63154 Gm40466-201ENSMUST00000212174 422 ntBASIC11.82□□□□□ -0.52
Crnkl1P63154 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Crnkl1P63154 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Crnkl1P63154 Gm8420-201ENSMUST00000097103 598 ntBASIC11.82□□□□□ -0.52
Crnkl1P63154 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Crnkl1P63154 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Crnkl1P63154 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.81□□□□□ -0.52
Crnkl1P63154 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Crnkl1P63154 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Crnkl1P63154 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms