Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Lsm3P62311 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Lsm3P62311 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Lsm3P62311 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Lsm3P62311 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.82□□□□□ -0.68
Lsm3P62311 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.82□□□□□ -0.68
Lsm3P62311 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lsm3P62311 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Lsm3P62311 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.82□□□□□ -0.68
Lsm3P62311 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.82□□□□□ -0.68
Lsm3P62311 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.82□□□□□ -0.68
Lsm3P62311 Gm6152-201ENSMUST00000151704 340 ntBASIC10.82□□□□□ -0.68
Lsm3P62311 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Lsm3P62311 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.82□□□□□ -0.68
Lsm3P62311 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC10.82□□□□□ -0.68
Lsm3P62311 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Lsm3P62311 Gm29667-201ENSMUST00000190817 490 ntBASIC10.82□□□□□ -0.68
Lsm3P62311 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.82□□□□□ -0.68
Lsm3P62311 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.82□□□□□ -0.68
Lsm3P62311 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lsm3P62311 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Lsm3P62311 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Lsm3P62311 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm3P62311 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Lsm3P62311 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Lsm3P62311 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Lsm3P62311 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Lsm3P62311 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Lsm3P62311 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Lsm3P62311 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.81□□□□□ -0.68
Lsm3P62311 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.81□□□□□ -0.68
Lsm3P62311 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.81□□□□□ -0.68
Lsm3P62311 Gm9083-201ENSMUST00000120423 819 ntBASIC10.81□□□□□ -0.68
Lsm3P62311 Gm5354-201ENSMUST00000182417 973 ntBASIC10.81□□□□□ -0.68
Lsm3P62311 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.81□□□□□ -0.68
Lsm3P62311 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.81□□□□□ -0.68
Lsm3P62311 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.81□□□□□ -0.68
Lsm3P62311 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Lsm3P62311 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Lsm3P62311 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms