Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Gm45865-201ENSMUST00000211815 945 ntBASIC10.56□□□□□ -0.72
Sec61a1P61620 Gm7046-201ENSMUST00000221351 977 ntBASIC10.56□□□□□ -0.72
Sec61a1P61620 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.56□□□□□ -0.72
Sec61a1P61620 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.55□□□□□ -0.72
Sec61a1P61620 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sec61a1P61620 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Gm13297-201ENSMUST00000120205 934 ntBASIC10.55□□□□□ -0.72
Sec61a1P61620 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.55□□□□□ -0.72
Sec61a1P61620 Gm38341-201ENSMUST00000195357 515 ntBASIC10.55□□□□□ -0.72
Sec61a1P61620 Gm44364-201ENSMUST00000198368 141 ntBASIC10.55□□□□□ -0.72
Sec61a1P61620 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Gm7783-201ENSMUST00000204795 781 ntBASIC10.55□□□□□ -0.72
Sec61a1P61620 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.55□□□□□ -0.72
Sec61a1P61620 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Gm24526-201ENSMUST00000082921 158 ntBASIC10.55□□□□□ -0.72
Sec61a1P61620 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.55□□□□□ -0.72
Sec61a1P61620 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sec61a1P61620 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sec61a1P61620 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.55□□□□□ -0.72
Sec61a1P61620 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.55□□□□□ -0.72
Sec61a1P61620 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sec61a1P61620 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.55□□□□□ -0.72
Sec61a1P61620 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Sec61a1P61620 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.54□□□□□ -0.72
Sec61a1P61620 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.54□□□□□ -0.72
Sec61a1P61620 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.54□□□□□ -0.72
Sec61a1P61620 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Sec61a1P61620 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms