Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tpm1P58771 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tpm1P58771 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.31□□□□□ -0.28
Tpm1P58771 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Tpm1P58771 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.31□□□□□ -0.28
Tpm1P58771 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Gm27847-201ENSMUST00000183711 107 ntBASIC13.31□□□□□ -0.28
Tpm1P58771 Gm27375-201ENSMUST00000183799 107 ntBASIC13.31□□□□□ -0.28
Tpm1P58771 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tpm1P58771 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.31□□□□□ -0.28
Tpm1P58771 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC13.31□□□□□ -0.28
Tpm1P58771 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tpm1P58771 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.31□□□□□ -0.28
Tpm1P58771 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tpm1P58771 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Gm38292-201ENSMUST00000192646 3045 ntBASIC13.3□□□□□ -0.28
Tpm1P58771 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tpm1P58771 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tpm1P58771 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tpm1P58771 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.3□□□□□ -0.28
Tpm1P58771 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tpm1P58771 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.3□□□□□ -0.28
Tpm1P58771 Gm14928-201ENSMUST00000120198 477 ntBASIC13.3□□□□□ -0.28
Tpm1P58771 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.3□□□□□ -0.28
Tpm1P58771 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.3□□□□□ -0.28
Tpm1P58771 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Gm26927-201ENSMUST00000182385 965 ntBASIC13.3□□□□□ -0.28
Tpm1P58771 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.3□□□□□ -0.28
Tpm1P58771 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tpm1P58771 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Gm10268-201ENSMUST00000085340 555 ntBASIC13.3□□□□□ -0.28
Tpm1P58771 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tpm1P58771 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.3□□□□□ -0.28
Tpm1P58771 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.3□□□□□ -0.28
Tpm1P58771 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tpm1P58771 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tpm1P58771 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Tpm1P58771 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Tpm1P58771 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.3□□□□□ -0.28
Tpm1P58771 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm1P58771 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC13.29□□□□□ -0.28
Tpm1P58771 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC13.29□□□□□ -0.28
Tpm1P58771 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC13.29□□□□□ -0.28
Tpm1P58771 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Gm42427-201ENSMUST00000200473 5292 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms