Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox3P53784 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox3P53784 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox3P53784 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox3P53784 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.5□□□□□ -0.57
Sox3P53784 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox3P53784 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sox3P53784 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox3P53784 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Sox3P53784 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox3P53784 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.49□□□□□ -0.57
Sox3P53784 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox3P53784 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Sox3P53784 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox3P53784 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Gm13035-201ENSMUST00000117496 342 ntBASIC11.49□□□□□ -0.57
Sox3P53784 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.49□□□□□ -0.57
Sox3P53784 Gm24845-201ENSMUST00000158034 109 ntBASIC11.49□□□□□ -0.57
Sox3P53784 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox3P53784 Mir6546-201ENSMUST00000184460 62 ntBASIC11.49□□□□□ -0.57
Sox3P53784 Gm28324-201ENSMUST00000187913 264 ntBASIC11.49□□□□□ -0.57
Sox3P53784 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.49□□□□□ -0.57
Sox3P53784 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.49□□□□□ -0.57
Sox3P53784 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.49□□□□□ -0.57
Sox3P53784 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Sox3P53784 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.49□□□□□ -0.57
Sox3P53784 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox3P53784 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox3P53784 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.49□□□□□ -0.57
Sox3P53784 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.49□□□□□ -0.57
Sox3P53784 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox3P53784 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Sox3P53784 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sox3P53784 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.48□□□□□ -0.57
Sox3P53784 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox3P53784 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sox3P53784 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sox3P53784 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox3P53784 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sox3P53784 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Gm14058-201ENSMUST00000116082 735 ntBASIC11.48□□□□□ -0.57
Sox3P53784 Gm14832-201ENSMUST00000121289 322 ntBASIC11.48□□□□□ -0.57
Sox3P53784 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Sox3P53784 Gm8492-201ENSMUST00000182375 987 ntBASIC11.48□□□□□ -0.57
Sox3P53784 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.48□□□□□ -0.57
Sox3P53784 Gm27627-201ENSMUST00000183644 150 ntBASIC11.48□□□□□ -0.57
Sox3P53784 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.48□□□□□ -0.57
Sox3P53784 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.48□□□□□ -0.57
Sox3P53784 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.48□□□□□ -0.57
Sox3P53784 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.48□□□□□ -0.57
Sox3P53784 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.48□□□□□ -0.57
Sox3P53784 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox3P53784 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sox3P53784 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms