Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm22334-201ENSMUST00000158070 133 ntBASIC11.35□□□□□ -0.59
RoraP51448 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
RoraP51448 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.35□□□□□ -0.59
RoraP51448 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Gm8343-201ENSMUST00000182705 994 ntBASIC11.35□□□□□ -0.59
RoraP51448 Gm4482-201ENSMUST00000200876 742 ntBASIC11.35□□□□□ -0.59
RoraP51448 Gm4157-201ENSMUST00000211647 679 ntBASIC11.35□□□□□ -0.59
RoraP51448 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.35□□□□□ -0.59
RoraP51448 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.35□□□□□ -0.59
RoraP51448 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.34□□□□□ -0.59
RoraP51448 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
RoraP51448 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.34□□□□□ -0.59
RoraP51448 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
RoraP51448 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
RoraP51448 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
RoraP51448 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
RoraP51448 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.34□□□□□ -0.59
RoraP51448 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.34□□□□□ -0.59
RoraP51448 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Gm19353-201ENSMUST00000184561 445 ntBASIC11.34□□□□□ -0.59
RoraP51448 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.34□□□□□ -0.59
RoraP51448 Gm3332-201ENSMUST00000189337 928 ntBASIC11.34□□□□□ -0.59
RoraP51448 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.34□□□□□ -0.59
RoraP51448 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.34□□□□□ -0.59
RoraP51448 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.34□□□□□ -0.59
RoraP51448 Gm807-202ENSMUST00000224929 408 ntBASIC11.34□□□□□ -0.59
RoraP51448 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
RoraP51448 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
RoraP51448 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.34□□□□□ -0.59
RoraP51448 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.34□□□□□ -0.59
RoraP51448 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
RoraP51448 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
RoraP51448 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.34□□□□□ -0.59
RoraP51448 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RoraP51448 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
RoraP51448 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
RoraP51448 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
RoraP51448 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
RoraP51448 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
RoraP51448 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
RoraP51448 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
RoraP51448 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
RoraP51448 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
RoraP51448 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.33□□□□□ -0.6
RoraP51448 Gm23251-201ENSMUST00000103773 110 ntBASIC11.33□□□□□ -0.6
RoraP51448 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.33□□□□□ -0.6
RoraP51448 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
RoraP51448 Gm11509-201ENSMUST00000117358 325 ntBASIC11.33□□□□□ -0.6
RoraP51448 Gm7851-201ENSMUST00000117574 323 ntBASIC11.33□□□□□ -0.6
RoraP51448 Gm13611-201ENSMUST00000118269 318 ntBASIC11.33□□□□□ -0.6
RoraP51448 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms