Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.89□□□□□ -0.83
Nkx2-1P50220 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.88□□□□□ -0.83
Nkx2-1P50220 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC9.88□□□□□ -0.83
Nkx2-1P50220 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Gm24644-201ENSMUST00000157114 139 ntBASIC9.88□□□□□ -0.83
Nkx2-1P50220 Gm22331-201ENSMUST00000158066 136 ntBASIC9.88□□□□□ -0.83
Nkx2-1P50220 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Gm7653-201ENSMUST00000214567 508 ntBASIC9.88□□□□□ -0.83
Nkx2-1P50220 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.88□□□□□ -0.83
Nkx2-1P50220 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nkx2-1P50220 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC9.87□□□□□ -0.83
Nkx2-1P50220 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Gm12363-201ENSMUST00000122250 668 ntBASIC9.87□□□□□ -0.83
Nkx2-1P50220 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms