Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Ercc3P49135 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.2□□□□□ -0.14
Ercc3P49135 Gm12217-201ENSMUST00000118858 696 ntBASIC14.2□□□□□ -0.14
Ercc3P49135 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.2□□□□□ -0.14
Ercc3P49135 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.2□□□□□ -0.14
Ercc3P49135 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.2□□□□□ -0.14
Ercc3P49135 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Ercc3P49135 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Gm5706-201ENSMUST00000181525 993 ntBASIC14.2□□□□□ -0.14
Ercc3P49135 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Gm18212-201ENSMUST00000211678 889 ntBASIC14.2□□□□□ -0.14
Ercc3P49135 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ercc3P49135 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.2□□□□□ -0.14
Ercc3P49135 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.2□□□□□ -0.14
Ercc3P49135 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ercc3P49135 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.2□□□□□ -0.14
Ercc3P49135 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ercc3P49135 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc3P49135 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.19□□□□□ -0.14
Ercc3P49135 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.19□□□□□ -0.14
Ercc3P49135 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ercc3P49135 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Gm23949-201ENSMUST00000104027 127 ntBASIC14.19□□□□□ -0.14
Ercc3P49135 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.19□□□□□ -0.14
Ercc3P49135 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.19□□□□□ -0.14
Ercc3P49135 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.19□□□□□ -0.14
Ercc3P49135 Gm26461-201ENSMUST00000175064 290 ntBASIC14.19□□□□□ -0.14
Ercc3P49135 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ercc3P49135 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ercc3P49135 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.19□□□□□ -0.14
Ercc3P49135 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.19□□□□□ -0.14
Ercc3P49135 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.19□□□□□ -0.14
Ercc3P49135 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.19□□□□□ -0.14
Ercc3P49135 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Ercc3P49135 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc3P49135 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ercc3P49135 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ercc3P49135 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.18□□□□□ -0.14
Ercc3P49135 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ercc3P49135 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ercc3P49135 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ercc3P49135 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ercc3P49135 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ercc3P49135 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ercc3P49135 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ercc3P49135 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ercc3P49135 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ercc3P49135 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ercc3P49135 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ercc3P49135 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Ercc3P49135 Gm11509-201ENSMUST00000117358 325 ntBASIC14.18□□□□□ -0.14
Ercc3P49135 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.18□□□□□ -0.14
Ercc3P49135 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ercc3P49135 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.18□□□□□ -0.14
Ercc3P49135 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Ercc3P49135 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.18□□□□□ -0.14
Ercc3P49135 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms