Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm13570-201ENSMUST00000140763 309 ntBASIC14.25□□□□□ -0.13
Rfx1P48377 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx1P48377 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.25□□□□□ -0.13
Rfx1P48377 Gm25927-201ENSMUST00000175058 117 ntBASIC14.25□□□□□ -0.13
Rfx1P48377 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx1P48377 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.25□□□□□ -0.13
Rfx1P48377 Gm43818-201ENSMUST00000200605 466 ntBASIC14.25□□□□□ -0.13
Rfx1P48377 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.25□□□□□ -0.13
Rfx1P48377 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx1P48377 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
Rfx1P48377 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx1P48377 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx1P48377 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.25□□□□□ -0.13
Rfx1P48377 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx1P48377 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx1P48377 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.25□□□□□ -0.13
Rfx1P48377 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx1P48377 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rfx1P48377 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rfx1P48377 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx1P48377 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.25□□□□□ -0.13
Rfx1P48377 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx1P48377 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx1P48377 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Rfx1P48377 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.24□□□□□ -0.13
Rfx1P48377 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Erich3-203ENSMUST00000189969 3460 ntBASIC14.24□□□□□ -0.13
Rfx1P48377 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rfx1P48377 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC14.24□□□□□ -0.13
Rfx1P48377 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.24□□□□□ -0.13
Rfx1P48377 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rfx1P48377 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Gm12490-201ENSMUST00000120255 560 ntBASIC14.24□□□□□ -0.13
Rfx1P48377 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.24□□□□□ -0.13
Rfx1P48377 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfx1P48377 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rfx1P48377 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.24□□□□□ -0.13
Rfx1P48377 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfx1P48377 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.24□□□□□ -0.13
Rfx1P48377 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rfx1P48377 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfx1P48377 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rfx1P48377 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rfx1P48377 Gm5859-201ENSMUST00000165401 2324 ntBASIC14.24□□□□□ -0.13
Rfx1P48377 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx1P48377 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx1P48377 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC14.23□□□□□ -0.13
Rfx1P48377 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx1P48377 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx1P48377 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx1P48377 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx1P48377 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx1P48377 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rfx1P48377 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx1P48377 Gm45677-201ENSMUST00000209975 1341 ntBASIC14.23□□□□□ -0.13
Rfx1P48377 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx1P48377 Gm13875-201ENSMUST00000120162 282 ntBASIC14.23□□□□□ -0.13
Rfx1P48377 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Rfx1P48377 Rprl1-201ENSMUST00000158050 327 ntBASIC14.23□□□□□ -0.13
Rfx1P48377 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfx1P48377 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx1P48377 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.23□□□□□ -0.13
Rfx1P48377 Gm42693-201ENSMUST00000196779 631 ntBASIC14.23□□□□□ -0.13
Rfx1P48377 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.23□□□□□ -0.13
Rfx1P48377 Gm40466-201ENSMUST00000212174 422 ntBASIC14.23□□□□□ -0.13
Rfx1P48377 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.23□□□□□ -0.13
Rfx1P48377 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.23□□□□□ -0.13
Rfx1P48377 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.23□□□□□ -0.13
Rfx1P48377 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx1P48377 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rfx1P48377 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rfx1P48377 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx1P48377 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx1P48377 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Rfx1P48377 Gm42463-201ENSMUST00000198041 4886 ntBASIC14.23□□□□□ -0.13
Rfx1P48377 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.23□□□□□ -0.13
Rfx1P48377 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms