Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.14□□□□□ -0.47
Vps4bP46467 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vps4bP46467 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.14□□□□□ -0.47
Vps4bP46467 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps4bP46467 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.14□□□□□ -0.47
Vps4bP46467 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps4bP46467 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vps4bP46467 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Vps4bP46467 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Vps4bP46467 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Gm4986-201ENSMUST00000119731 549 ntBASIC12.13□□□□□ -0.47
Vps4bP46467 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.13□□□□□ -0.47
Vps4bP46467 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Vps4bP46467 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.13□□□□□ -0.47
Vps4bP46467 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Vps4bP46467 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.13□□□□□ -0.47
Vps4bP46467 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Gm7046-201ENSMUST00000221351 977 ntBASIC12.13□□□□□ -0.47
Vps4bP46467 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.13□□□□□ -0.47
Vps4bP46467 Morn2-202ENSMUST00000227729 656 ntBASIC12.13□□□□□ -0.47
Vps4bP46467 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps4bP46467 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vps4bP46467 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.13□□□□□ -0.47
Vps4bP46467 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.13□□□□□ -0.47
Vps4bP46467 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps4bP46467 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps4bP46467 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.12□□□□□ -0.47
Vps4bP46467 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vps4bP46467 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Vps4bP46467 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Vps4bP46467 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.12□□□□□ -0.47
Vps4bP46467 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vps4bP46467 Gm11531-201ENSMUST00000117614 555 ntBASIC12.12□□□□□ -0.47
Vps4bP46467 Gm14381-201ENSMUST00000122105 414 ntBASIC12.12□□□□□ -0.47
Vps4bP46467 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.12□□□□□ -0.47
Vps4bP46467 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.12□□□□□ -0.47
Vps4bP46467 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.12□□□□□ -0.47
Vps4bP46467 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.12□□□□□ -0.47
Vps4bP46467 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.12□□□□□ -0.47
Vps4bP46467 Gm37489-201ENSMUST00000191883 159 ntBASIC12.12□□□□□ -0.47
Vps4bP46467 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Gm19994-201ENSMUST00000217086 586 ntBASIC12.12□□□□□ -0.47
Vps4bP46467 Cts7-204ENSMUST00000225321 1257 ntBASIC12.12□□□□□ -0.47
Vps4bP46467 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.12□□□□□ -0.47
Vps4bP46467 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.12□□□□□ -0.47
Vps4bP46467 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Vps4bP46467 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps4bP46467 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms