Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Gm11663-201ENSMUST00000117888 290 ntBASIC11.32□□□□□ -0.6
Nkx2-6P43688 Gm5419-201ENSMUST00000119301 527 ntBASIC11.32□□□□□ -0.6
Nkx2-6P43688 Gm12208-201ENSMUST00000122004 163 ntBASIC11.32□□□□□ -0.6
Nkx2-6P43688 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Gm37246-201ENSMUST00000192665 835 ntBASIC11.32□□□□□ -0.6
Nkx2-6P43688 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.32□□□□□ -0.6
Nkx2-6P43688 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.32□□□□□ -0.6
Nkx2-6P43688 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.31□□□□□ -0.6
Nkx2-6P43688 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.31□□□□□ -0.6
Nkx2-6P43688 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Gm19459-201ENSMUST00000176240 835 ntBASIC11.31□□□□□ -0.6
Nkx2-6P43688 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Mir6546-201ENSMUST00000184460 62 ntBASIC11.31□□□□□ -0.6
Nkx2-6P43688 Mir7032-201ENSMUST00000185154 79 ntBASIC11.31□□□□□ -0.6
Nkx2-6P43688 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.31□□□□□ -0.6
Nkx2-6P43688 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.31□□□□□ -0.6
Nkx2-6P43688 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.31□□□□□ -0.6
Nkx2-6P43688 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-6P43688 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.31□□□□□ -0.6
Nkx2-6P43688 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.3□□□□□ -0.6
Nkx2-6P43688 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 109.5 ms