Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.68□□□□□ -0.54
Sox18P43680 Gm42995-201ENSMUST00000197047 1330 ntBASIC11.68□□□□□ -0.54
Sox18P43680 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sox18P43680 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.68□□□□□ -0.54
Sox18P43680 Gm14938-201ENSMUST00000119482 943 ntBASIC11.68□□□□□ -0.54
Sox18P43680 Gm11510-201ENSMUST00000120278 347 ntBASIC11.68□□□□□ -0.54
Sox18P43680 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox18P43680 Gm6485-201ENSMUST00000160676 439 ntBASIC11.68□□□□□ -0.54
Sox18P43680 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sox18P43680 Gm42734-201ENSMUST00000201656 878 ntBASIC11.68□□□□□ -0.54
Sox18P43680 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sox18P43680 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox18P43680 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox18P43680 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC11.68□□□□□ -0.54
Sox18P43680 Gm7441-201ENSMUST00000220697 1074 ntBASIC11.68□□□□□ -0.54
Sox18P43680 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.68□□□□□ -0.54
Sox18P43680 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sox18P43680 Gm5455-201ENSMUST00000058710 715 ntBASIC11.68□□□□□ -0.54
Sox18P43680 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.68□□□□□ -0.54
Sox18P43680 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.68□□□□□ -0.54
Sox18P43680 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Gm20541-201ENSMUST00000173035 1406 ntBASIC11.68□□□□□ -0.54
Sox18P43680 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.68□□□□□ -0.54
Sox18P43680 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sox18P43680 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Sox18P43680 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.67□□□□□ -0.54
Sox18P43680 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sox18P43680 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Sox18P43680 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Gm7541-201ENSMUST00000118361 535 ntBASIC11.67□□□□□ -0.54
Sox18P43680 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Sox18P43680 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.67□□□□□ -0.54
Sox18P43680 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.67□□□□□ -0.54
Sox18P43680 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox18P43680 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Gm4862-201ENSMUST00000170405 438 ntBASIC11.67□□□□□ -0.54
Sox18P43680 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.67□□□□□ -0.54
Sox18P43680 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.67□□□□□ -0.54
Sox18P43680 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
Sox18P43680 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Gm27530-201ENSMUST00000184096 98 ntBASIC11.67□□□□□ -0.54
Sox18P43680 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.67□□□□□ -0.54
Sox18P43680 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Gm44329-201ENSMUST00000197469 112 ntBASIC11.67□□□□□ -0.54
Sox18P43680 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.67□□□□□ -0.54
Sox18P43680 AC133598.4-201ENSMUST00000224577 454 ntBASIC11.67□□□□□ -0.54
Sox18P43680 AC154245.1-201ENSMUST00000224615 601 ntBASIC11.67□□□□□ -0.54
Sox18P43680 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sox18P43680 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.67□□□□□ -0.54
Sox18P43680 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Sox18P43680 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Sox18P43680 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sox18P43680 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sox18P43680 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms