Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm11544-201ENSMUST00000120215 382 ntBASIC12.31□□□□□ -0.44
HttP42859 Nsmce2-203ENSMUST00000227173 1122 ntBASIC12.31□□□□□ -0.44
HttP42859 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HttP42859 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Gm7701-201ENSMUST00000163185 1479 ntBASIC12.31□□□□□ -0.44
HttP42859 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HttP42859 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
HttP42859 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.31□□□□□ -0.44
HttP42859 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
HttP42859 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
HttP42859 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HttP42859 Gm14148-201ENSMUST00000122433 1008 ntBASIC12.3□□□□□ -0.44
HttP42859 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Gm23432-201ENSMUST00000157181 131 ntBASIC12.3□□□□□ -0.44
HttP42859 Gm20495-201ENSMUST00000173902 235 ntBASIC12.3□□□□□ -0.44
HttP42859 Gm25591-201ENSMUST00000177317 94 ntBASIC12.3□□□□□ -0.44
HttP42859 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HttP42859 Gm29067-201ENSMUST00000190821 470 ntBASIC12.3□□□□□ -0.44
HttP42859 AC116797.2-202ENSMUST00000223587 1017 ntBASIC12.3□□□□□ -0.44
HttP42859 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HttP42859 Gm17836-201ENSMUST00000191976 1302 ntBASIC12.3□□□□□ -0.44
HttP42859 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
HttP42859 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC12.3□□□□□ -0.44
HttP42859 Gm14071-201ENSMUST00000117817 509 ntBASIC12.3□□□□□ -0.44
HttP42859 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Gm18733-202ENSMUST00000174447 401 ntBASIC12.3□□□□□ -0.44
HttP42859 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC12.3□□□□□ -0.44
HttP42859 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.3□□□□□ -0.44
HttP42859 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HttP42859 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
HttP42859 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Fam220-ps-201ENSMUST00000116535 783 ntBASIC12.29□□□□□ -0.44
HttP42859 Gm24140-201ENSMUST00000122773 326 ntBASIC12.29□□□□□ -0.44
HttP42859 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
HttP42859 BB187690-201ENSMUST00000198619 1176 ntBASIC12.29□□□□□ -0.44
HttP42859 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
HttP42859 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
HttP42859 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.29□□□□□ -0.44
HttP42859 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC12.29□□□□□ -0.44
HttP42859 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
HttP42859 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Gm2566-201ENSMUST00000201267 431 ntBASIC12.29□□□□□ -0.44
HttP42859 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Gm7727-201ENSMUST00000219830 671 ntBASIC12.29□□□□□ -0.44
HttP42859 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.29□□□□□ -0.44
HttP42859 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HttP42859 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
HttP42859 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.28□□□□□ -0.44
HttP42859 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms