Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Rpl28P41105 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Rpl28P41105 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Rpl28P41105 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Rpl28P41105 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Rpl28P41105 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC8.04□□□□□ -1.12
Rpl28P41105 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl28P41105 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Gm44207-201ENSMUST00000204568 1424 ntBASIC8.03□□□□□ -1.12
Rpl28P41105 AC108858.2-201ENSMUST00000228186 1425 ntBASIC8.03□□□□□ -1.12
Rpl28P41105 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Rpl28P41105 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Gm10339-203ENSMUST00000225409 1671 ntBASIC8.03□□□□□ -1.12
Rpl28P41105 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Gm44775-201ENSMUST00000207266 1456 ntBASIC8.03□□□□□ -1.12
Rpl28P41105 Zscan30-202ENSMUST00000224144 1458 ntBASIC8.03□□□□□ -1.12
Rpl28P41105 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC8.03□□□□□ -1.12
Rpl28P41105 Gm24231-201ENSMUST00000104315 133 ntBASIC8.03□□□□□ -1.12
Rpl28P41105 Gm13492-201ENSMUST00000119772 665 ntBASIC8.03□□□□□ -1.12
Rpl28P41105 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC8.03□□□□□ -1.12
Rpl28P41105 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC8.03□□□□□ -1.12
Rpl28P41105 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Gm22121-201ENSMUST00000175148 54 ntBASIC8.03□□□□□ -1.12
Rpl28P41105 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC8.03□□□□□ -1.12
Rpl28P41105 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC8.03□□□□□ -1.12
Rpl28P41105 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Gm8420-201ENSMUST00000097103 598 ntBASIC8.03□□□□□ -1.12
Rpl28P41105 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Rpl28P41105 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Rpl28P41105 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Gm37931-201ENSMUST00000194686 2866 ntBASIC8.03□□□□□ -1.12
Rpl28P41105 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms