Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
TfamP40630 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.57□□□□□ -0.56
TfamP40630 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
TfamP40630 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Gm13786-201ENSMUST00000122371 333 ntBASIC11.57□□□□□ -0.56
TfamP40630 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.57□□□□□ -0.56
TfamP40630 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.57□□□□□ -0.56
TfamP40630 Gm5706-201ENSMUST00000181525 993 ntBASIC11.57□□□□□ -0.56
TfamP40630 Gm37489-201ENSMUST00000191883 159 ntBASIC11.57□□□□□ -0.56
TfamP40630 Gm9136-201ENSMUST00000193368 454 ntBASIC11.57□□□□□ -0.56
TfamP40630 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.57□□□□□ -0.56
TfamP40630 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Gm9823-201ENSMUST00000051212 327 ntBASIC11.57□□□□□ -0.56
TfamP40630 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
TfamP40630 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
TfamP40630 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.57□□□□□ -0.56
TfamP40630 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.57□□□□□ -0.56
TfamP40630 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
TfamP40630 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.57□□□□□ -0.56
TfamP40630 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
TfamP40630 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
TfamP40630 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.56□□□□□ -0.56
TfamP40630 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
TfamP40630 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.56□□□□□ -0.56
TfamP40630 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
TfamP40630 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
TfamP40630 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.56□□□□□ -0.56
TfamP40630 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.56□□□□□ -0.56
TfamP40630 Gm18062-201ENSMUST00000208020 547 ntBASIC11.56□□□□□ -0.56
TfamP40630 Gm18055-201ENSMUST00000208254 547 ntBASIC11.56□□□□□ -0.56
TfamP40630 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.56□□□□□ -0.56
TfamP40630 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
TfamP40630 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.56□□□□□ -0.56
TfamP40630 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.56□□□□□ -0.56
TfamP40630 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TfamP40630 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.56□□□□□ -0.56
TfamP40630 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.55□□□□□ -0.56
TfamP40630 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TfamP40630 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.55□□□□□ -0.56
TfamP40630 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.55□□□□□ -0.56
TfamP40630 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TfamP40630 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TfamP40630 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
TfamP40630 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TfamP40630 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
TfamP40630 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TfamP40630 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TfamP40630 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
TfamP40630 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TfamP40630 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TfamP40630 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TfamP40630 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
TfamP40630 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.55□□□□□ -0.56
TfamP40630 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TfamP40630 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
TfamP40630 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.55□□□□□ -0.56
TfamP40630 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TfamP40630 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TfamP40630 Gm15370-201ENSMUST00000117158 253 ntBASIC11.55□□□□□ -0.56
TfamP40630 Gm15610-201ENSMUST00000120584 195 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms