Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd1P40201 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chd1P40201 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd1P40201 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Chd1P40201 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chd1P40201 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chd1P40201 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC17.52■□□□□ 0.39
Chd1P40201 Gm7183-201ENSMUST00000213870 1005 ntBASIC17.52■□□□□ 0.39
Chd1P40201 Gm29689-201ENSMUST00000221076 589 ntBASIC17.52■□□□□ 0.39
Chd1P40201 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd1P40201 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd1P40201 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd1P40201 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd1P40201 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC17.51■□□□□ 0.39
Chd1P40201 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Chd1P40201 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chd1P40201 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC17.51■□□□□ 0.39
Chd1P40201 Gm15617-201ENSMUST00000118973 771 ntBASIC17.51■□□□□ 0.39
Chd1P40201 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC17.51■□□□□ 0.39
Chd1P40201 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC17.51■□□□□ 0.39
Chd1P40201 Gm4753-201ENSMUST00000188327 1255 ntBASIC17.51■□□□□ 0.39
Chd1P40201 Gm38314-201ENSMUST00000195709 625 ntBASIC17.51■□□□□ 0.39
Chd1P40201 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC17.51■□□□□ 0.39
Chd1P40201 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 Gm5278-201ENSMUST00000055957 552 ntBASIC17.51■□□□□ 0.39
Chd1P40201 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC17.51■□□□□ 0.39
Chd1P40201 Gm7841-201ENSMUST00000122108 1629 ntBASIC17.51■□□□□ 0.39
Chd1P40201 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Chd1P40201 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1P40201 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC17.5■□□□□ 0.39
Chd1P40201 Gm13426-201ENSMUST00000117887 795 ntBASIC17.5■□□□□ 0.39
Chd1P40201 Gm14176-201ENSMUST00000121302 477 ntBASIC17.5■□□□□ 0.39
Chd1P40201 Gm25288-201ENSMUST00000122800 265 ntBASIC17.5■□□□□ 0.39
Chd1P40201 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC17.5■□□□□ 0.39
Chd1P40201 Gm5526-201ENSMUST00000153604 423 ntBASIC17.5■□□□□ 0.39
Chd1P40201 Kif4-ps-202ENSMUST00000185083 652 ntBASIC17.5■□□□□ 0.39
Chd1P40201 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC17.5■□□□□ 0.39
Chd1P40201 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC17.5■□□□□ 0.39
Chd1P40201 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC17.5■□□□□ 0.39
Chd1P40201 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1P40201 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1P40201 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC17.5■□□□□ 0.39
Chd1P40201 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1P40201 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1P40201 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Chd1P40201 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1P40201 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1P40201 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1P40201 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1P40201 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Chd1P40201 Gm5822-201ENSMUST00000161562 1378 ntBASIC17.5■□□□□ 0.39
Chd1P40201 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1P40201 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1P40201 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1P40201 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Chd1P40201 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Chd1P40201 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1P40201 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Chd1P40201 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Chd1P40201 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1P40201 n-R5s130-201ENSMUST00000178128 119 ntBASIC17.5■□□□□ 0.39
Chd1P40201 Gm24312-201ENSMUST00000178677 119 ntBASIC17.5■□□□□ 0.39
Chd1P40201 n-R5s106-201ENSMUST00000179060 119 ntBASIC17.5■□□□□ 0.39
Chd1P40201 n-R5s118-201ENSMUST00000179887 119 ntBASIC17.5■□□□□ 0.39
Chd1P40201 Gm6291-201ENSMUST00000179994 309 ntBASIC17.5■□□□□ 0.39
Chd1P40201 Gm5190-201ENSMUST00000192434 357 ntBASIC17.5■□□□□ 0.39
Chd1P40201 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC17.5■□□□□ 0.39
Chd1P40201 AC163638.2-201ENSMUST00000224920 827 ntBASIC17.5■□□□□ 0.39
Chd1P40201 Mir341-201ENSMUST00000093593 96 ntBASIC17.5■□□□□ 0.39
Chd1P40201 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Chd1P40201 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Chd1P40201 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms