Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdh4P39038 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh4P39038 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh4P39038 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.47□□□□□ -0.57
Cdh4P39038 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh4P39038 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cdh4P39038 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.47□□□□□ -0.57
Cdh4P39038 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh4P39038 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cdh4P39038 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cdh4P39038 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh4P39038 Gm15610-201ENSMUST00000120584 195 ntBASIC11.47□□□□□ -0.57
Cdh4P39038 Gm12164-201ENSMUST00000121695 551 ntBASIC11.47□□□□□ -0.57
Cdh4P39038 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.47□□□□□ -0.57
Cdh4P39038 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdh4P39038 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdh4P39038 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.47□□□□□ -0.57
Cdh4P39038 Gm24749-201ENSMUST00000157838 343 ntBASIC11.47□□□□□ -0.57
Cdh4P39038 Gm5616-201ENSMUST00000165252 384 ntBASIC11.47□□□□□ -0.57
Cdh4P39038 Gm8741-201ENSMUST00000174736 384 ntBASIC11.47□□□□□ -0.57
Cdh4P39038 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.47□□□□□ -0.57
Cdh4P39038 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdh4P39038 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cdh4P39038 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.47□□□□□ -0.57
Cdh4P39038 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh4P39038 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cdh4P39038 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Cdh4P39038 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh4P39038 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh4P39038 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh4P39038 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh4P39038 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdh4P39038 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdh4P39038 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh4P39038 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cdh4P39038 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh4P39038 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdh4P39038 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh4P39038 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh4P39038 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh4P39038 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cdh4P39038 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cdh4P39038 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.46□□□□□ -0.57
Cdh4P39038 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Gm5419-201ENSMUST00000119301 527 ntBASIC11.46□□□□□ -0.57
Cdh4P39038 Gm12997-201ENSMUST00000120207 640 ntBASIC11.46□□□□□ -0.57
Cdh4P39038 Gm14277-201ENSMUST00000121195 360 ntBASIC11.46□□□□□ -0.57
Cdh4P39038 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.46□□□□□ -0.57
Cdh4P39038 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.46□□□□□ -0.57
Cdh4P39038 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.46□□□□□ -0.57
Cdh4P39038 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.46□□□□□ -0.57
Cdh4P39038 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Gm4607-201ENSMUST00000206649 577 ntBASIC11.46□□□□□ -0.57
Cdh4P39038 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh4P39038 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.46□□□□□ -0.57
Cdh4P39038 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cdh4P39038 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cdh4P39038 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh4P39038 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh4P39038 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.46□□□□□ -0.58
Cdh4P39038 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh4P39038 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh4P39038 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.46□□□□□ -0.58
Cdh4P39038 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh4P39038 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh4P39038 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh4P39038 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh4P39038 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.45□□□□□ -0.58
Cdh4P39038 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cdh4P39038 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh4P39038 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh4P39038 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh4P39038 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh4P39038 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Cdh4P39038 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cdh4P39038 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh4P39038 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdh4P39038 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.45□□□□□ -0.58
Cdh4P39038 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms