Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.24□□□□□ -0.45
Mmp13P33435 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Mmp13P33435 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.24□□□□□ -0.45
Mmp13P33435 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.23□□□□□ -0.45
Mmp13P33435 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Mmp13P33435 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Mmp13P33435 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Mmp13P33435 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Mmp13P33435 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Mmp13P33435 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.23□□□□□ -0.45
Mmp13P33435 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.23□□□□□ -0.45
Mmp13P33435 Gm26083-201ENSMUST00000157904 193 ntBASIC12.23□□□□□ -0.45
Mmp13P33435 Gm25043-201ENSMUST00000158604 212 ntBASIC12.23□□□□□ -0.45
Mmp13P33435 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.23□□□□□ -0.45
Mmp13P33435 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.23□□□□□ -0.45
Mmp13P33435 Gm5950-201ENSMUST00000213337 772 ntBASIC12.23□□□□□ -0.45
Mmp13P33435 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.23□□□□□ -0.45
Mmp13P33435 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Mmp13P33435 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.23□□□□□ -0.45
Mmp13P33435 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Mmp13P33435 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.23□□□□□ -0.45
Mmp13P33435 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.23□□□□□ -0.45
Mmp13P33435 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Mmp13P33435 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp13P33435 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.22□□□□□ -0.45
Mmp13P33435 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.22□□□□□ -0.45
Mmp13P33435 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.22□□□□□ -0.45
Mmp13P33435 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Mmp13P33435 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.22□□□□□ -0.45
Mmp13P33435 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.22□□□□□ -0.45
Mmp13P33435 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.22□□□□□ -0.45
Mmp13P33435 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Mmp13P33435 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Mmp13P33435 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.22□□□□□ -0.45
Mmp13P33435 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.22□□□□□ -0.45
Mmp13P33435 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.22□□□□□ -0.45
Mmp13P33435 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp13P33435 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Mmp13P33435 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp13P33435 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp13P33435 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp13P33435 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp13P33435 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp13P33435 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms