Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp3P28862 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp3P28862 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp3P28862 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Mmp3P28862 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Mmp3P28862 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp3P28862 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp3P28862 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp3P28862 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp3P28862 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Mmp3P28862 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp3P28862 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Mmp3P28862 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp3P28862 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Mmp3P28862 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Mmp3P28862 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Mmp3P28862 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Mmp3P28862 Gm14441-201ENSMUST00000121960 540 ntBASIC12.76□□□□□ -0.37
Mmp3P28862 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.76□□□□□ -0.37
Mmp3P28862 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.76□□□□□ -0.37
Mmp3P28862 Gm10731-201ENSMUST00000181171 448 ntBASIC12.76□□□□□ -0.37
Mmp3P28862 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.76□□□□□ -0.37
Mmp3P28862 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.76□□□□□ -0.37
Mmp3P28862 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.76□□□□□ -0.37
Mmp3P28862 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.76□□□□□ -0.37
Mmp3P28862 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.76□□□□□ -0.37
Mmp3P28862 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Snora73b-201ENSMUST00000083419 205 ntBASIC12.76□□□□□ -0.37
Mmp3P28862 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.76□□□□□ -0.37
Mmp3P28862 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.76□□□□□ -0.37
Mmp3P28862 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.76□□□□□ -0.37
Mmp3P28862 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.76□□□□□ -0.37
Mmp3P28862 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Mmp3P28862 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp3P28862 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Mmp3P28862 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.75□□□□□ -0.37
Mmp3P28862 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Mmp3P28862 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Mmp3P28862 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.75□□□□□ -0.37
Mmp3P28862 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.75□□□□□ -0.37
Mmp3P28862 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Gm23771-201ENSMUST00000178702 110 ntBASIC12.75□□□□□ -0.37
Mmp3P28862 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.75□□□□□ -0.37
Mmp3P28862 Gm44980-201ENSMUST00000205826 314 ntBASIC12.75□□□□□ -0.37
Mmp3P28862 Gm44506-201ENSMUST00000206278 965 ntBASIC12.75□□□□□ -0.37
Mmp3P28862 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.75□□□□□ -0.37
Mmp3P28862 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.75□□□□□ -0.37
Mmp3P28862 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Mmp3P28862 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Mmp3P28862 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Mmp3P28862 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp3P28862 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Mmp3P28862 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms