Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6aP27664 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6aP27664 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Pde6aP27664 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.84□□□□□ -0.19
Pde6aP27664 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6aP27664 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6aP27664 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6aP27664 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6aP27664 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6aP27664 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pde6aP27664 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.83□□□□□ -0.19
Pde6aP27664 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pde6aP27664 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Pde6aP27664 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pde6aP27664 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Pde6aP27664 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pde6aP27664 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pde6aP27664 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pde6aP27664 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pde6aP27664 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 Gm12857-201ENSMUST00000117678 592 ntBASIC13.83□□□□□ -0.2
Pde6aP27664 Gm12196-201ENSMUST00000120954 262 ntBASIC13.83□□□□□ -0.2
Pde6aP27664 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.83□□□□□ -0.2
Pde6aP27664 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.83□□□□□ -0.2
Pde6aP27664 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Pde6aP27664 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.83□□□□□ -0.2
Pde6aP27664 Gm25732-201ENSMUST00000175168 60 ntBASIC13.83□□□□□ -0.2
Pde6aP27664 Gm38117-201ENSMUST00000194653 939 ntBASIC13.83□□□□□ -0.2
Pde6aP27664 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 AU022133-201ENSMUST00000200601 873 ntBASIC13.83□□□□□ -0.2
Pde6aP27664 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.83□□□□□ -0.2
Pde6aP27664 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.83□□□□□ -0.2
Pde6aP27664 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.83□□□□□ -0.2
Pde6aP27664 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.83□□□□□ -0.2
Pde6aP27664 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Pde6aP27664 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pde6aP27664 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.83□□□□□ -0.2
Pde6aP27664 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pde6aP27664 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pde6aP27664 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6aP27664 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.82□□□□□ -0.2
Pde6aP27664 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pde6aP27664 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.82□□□□□ -0.2
Pde6aP27664 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.82□□□□□ -0.2
Pde6aP27664 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Gm8566-201ENSMUST00000120174 465 ntBASIC13.82□□□□□ -0.2
Pde6aP27664 Gm12266-201ENSMUST00000120311 962 ntBASIC13.82□□□□□ -0.2
Pde6aP27664 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.82□□□□□ -0.2
Pde6aP27664 Gm25881-201ENSMUST00000157783 103 ntBASIC13.82□□□□□ -0.2
Pde6aP27664 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.82□□□□□ -0.2
Pde6aP27664 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Pde6aP27664 Mir6927-201ENSMUST00000184494 71 ntBASIC13.82□□□□□ -0.2
Pde6aP27664 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.82□□□□□ -0.2
Pde6aP27664 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.82□□□□□ -0.2
Pde6aP27664 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.82□□□□□ -0.2
Pde6aP27664 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Pde6aP27664 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.82□□□□□ -0.2
Pde6aP27664 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.82□□□□□ -0.2
Pde6aP27664 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Pde6aP27664 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6aP27664 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pde6aP27664 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pde6aP27664 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6aP27664 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.81□□□□□ -0.2
Pde6aP27664 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms