Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hoxc9P09633 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Hoxc9P09633 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hoxc9P09633 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hoxc9P09633 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hoxc9P09633 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hoxc9P09633 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hoxc9P09633 Gm12030-201ENSMUST00000121917 223 ntBASIC15.39■□□□□ 0.05
Hoxc9P09633 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hoxc9P09633 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC15.39■□□□□ 0.05
Hoxc9P09633 Gm45410-201ENSMUST00000211331 1093 ntBASIC15.39■□□□□ 0.05
Hoxc9P09633 CT009536.2-201ENSMUST00000225370 665 ntBASIC15.39■□□□□ 0.05
Hoxc9P09633 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Hoxc9P09633 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hoxc9P09633 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hoxc9P09633 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hoxc9P09633 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hoxc9P09633 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hoxc9P09633 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hoxc9P09633 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hoxc9P09633 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Hoxc9P09633 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Hoxc9P09633 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hoxc9P09633 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hoxc9P09633 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hoxc9P09633 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Hoxc9P09633 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hoxc9P09633 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hoxc9P09633 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hoxc9P09633 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hoxc9P09633 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hoxc9P09633 Gm14219-201ENSMUST00000120414 288 ntBASIC15.38■□□□□ 0.05
Hoxc9P09633 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC15.38■□□□□ 0.05
Hoxc9P09633 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC15.38■□□□□ 0.05
Hoxc9P09633 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hoxc9P09633 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hoxc9P09633 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC15.38■□□□□ 0.05
Hoxc9P09633 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC15.38■□□□□ 0.05
Hoxc9P09633 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC15.38■□□□□ 0.05
Hoxc9P09633 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC15.38■□□□□ 0.05
Hoxc9P09633 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hoxc9P09633 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Hoxc9P09633 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC15.38■□□□□ 0.05
Hoxc9P09633 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Hoxc9P09633 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.38■□□□□ 0.05
Hoxc9P09633 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hoxc9P09633 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hoxc9P09633 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hoxc9P09633 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 AC164702.1-201ENSMUST00000220135 2212 ntBASIC15.37■□□□□ 0.05
Hoxc9P09633 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Hoxc9P09633 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Hoxc9P09633 AC093022.4-203ENSMUST00000228523 2657 ntBASIC15.37■□□□□ 0.05
Hoxc9P09633 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 Gm12247-201ENSMUST00000117585 670 ntBASIC15.37■□□□□ 0.05
Hoxc9P09633 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC15.37■□□□□ 0.05
Hoxc9P09633 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC15.37■□□□□ 0.05
Hoxc9P09633 Gm7741-201ENSMUST00000181445 989 ntBASIC15.37■□□□□ 0.05
Hoxc9P09633 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC15.37■□□□□ 0.05
Hoxc9P09633 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC15.37■□□□□ 0.05
Hoxc9P09633 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC15.37■□□□□ 0.05
Hoxc9P09633 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Hoxc9P09633 AC122346.3-201ENSMUST00000223983 306 ntBASIC15.37■□□□□ 0.05
Hoxc9P09633 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Hoxc9P09633 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Hoxc9P09633 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC15.37■□□□□ 0.05
Hoxc9P09633 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Hoxc9P09633 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Hoxc9P09633 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hoxc9P09633 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Hoxc9P09633 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Hoxc9P09633 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Hoxc9P09633 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Hoxc9P09633 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Hoxc9P09633 Gm14892-201ENSMUST00000117636 267 ntBASIC15.36■□□□□ 0.05
Hoxc9P09633 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Hoxc9P09633 Gm14395-201ENSMUST00000120494 563 ntBASIC15.36■□□□□ 0.05
Hoxc9P09633 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms