Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
P06344 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
P06344 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.66□□□□□ -0.7
P06344 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.66□□□□□ -0.7
P06344 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.66□□□□□ -0.7
P06344 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
P06344 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
P06344 Gm11511-201ENSMUST00000118146 540 ntBASIC10.66□□□□□ -0.7
P06344 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.66□□□□□ -0.7
P06344 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.66□□□□□ -0.7
P06344 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Mir3102-201ENSMUST00000175555 104 ntBASIC10.66□□□□□ -0.7
P06344 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
P06344 AU022133-201ENSMUST00000200601 873 ntBASIC10.66□□□□□ -0.7
P06344 Gm8956-201ENSMUST00000203939 825 ntBASIC10.66□□□□□ -0.7
P06344 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.66□□□□□ -0.7
P06344 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.66□□□□□ -0.7
P06344 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
P06344 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
P06344 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
P06344 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P06344 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
P06344 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P06344 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
P06344 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.65□□□□□ -0.7
P06344 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.65□□□□□ -0.7
P06344 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
P06344 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P06344 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
P06344 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
P06344 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.65□□□□□ -0.7
P06344 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.65□□□□□ -0.7
P06344 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
P06344 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
P06344 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
P06344 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.65□□□□□ -0.7
P06344 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
P06344 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
P06344 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.65□□□□□ -0.7
P06344 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P06344 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P06344 Gm26286-201ENSMUST00000104166 134 ntBASIC10.65□□□□□ -0.7
P06344 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P06344 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.65□□□□□ -0.7
P06344 Gm5419-201ENSMUST00000119301 527 ntBASIC10.65□□□□□ -0.7
P06344 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.65□□□□□ -0.7
P06344 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.65□□□□□ -0.7
P06344 Gm18734-201ENSMUST00000172937 808 ntBASIC10.65□□□□□ -0.7
P06344 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.65□□□□□ -0.7
P06344 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.65□□□□□ -0.7
P06344 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
P06344 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.65□□□□□ -0.7
P06344 Gm4157-201ENSMUST00000211647 679 ntBASIC10.65□□□□□ -0.7
P06344 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.65□□□□□ -0.7
P06344 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P06344 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
P06344 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P06344 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P06344 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P06344 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.65□□□□□ -0.7
P06344 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms