Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
PrnpP04925 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
PrnpP04925 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
PrnpP04925 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.35□□□□□ -0.43
PrnpP04925 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.35□□□□□ -0.43
PrnpP04925 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Gm23272-201ENSMUST00000104053 129 ntBASIC12.35□□□□□ -0.43
PrnpP04925 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.35□□□□□ -0.43
PrnpP04925 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.35□□□□□ -0.43
PrnpP04925 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Gm8459-201ENSMUST00000162504 760 ntBASIC12.35□□□□□ -0.43
PrnpP04925 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Gm10807-201ENSMUST00000177134 795 ntBASIC12.35□□□□□ -0.43
PrnpP04925 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Gm9192-201ENSMUST00000183221 985 ntBASIC12.35□□□□□ -0.43
PrnpP04925 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.35□□□□□ -0.43
PrnpP04925 Gm8531-201ENSMUST00000188319 893 ntBASIC12.35□□□□□ -0.43
PrnpP04925 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
PrnpP04925 Gm5298-201ENSMUST00000201122 892 ntBASIC12.35□□□□□ -0.43
PrnpP04925 Gm8574-201ENSMUST00000203207 924 ntBASIC12.35□□□□□ -0.43
PrnpP04925 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.35□□□□□ -0.43
PrnpP04925 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
PrnpP04925 Gm45594-201ENSMUST00000211717 241 ntBASIC12.35□□□□□ -0.43
PrnpP04925 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.35□□□□□ -0.43
PrnpP04925 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
PrnpP04925 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.35□□□□□ -0.43
PrnpP04925 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrnpP04925 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
PrnpP04925 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
PrnpP04925 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
PrnpP04925 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.34□□□□□ -0.43
PrnpP04925 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
PrnpP04925 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
PrnpP04925 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
PrnpP04925 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.34□□□□□ -0.43
PrnpP04925 Gm12036-201ENSMUST00000120008 530 ntBASIC12.34□□□□□ -0.43
PrnpP04925 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.34□□□□□ -0.43
PrnpP04925 Gm12628-201ENSMUST00000122193 382 ntBASIC12.34□□□□□ -0.43
PrnpP04925 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.34□□□□□ -0.43
PrnpP04925 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.34□□□□□ -0.43
PrnpP04925 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.34□□□□□ -0.43
PrnpP04925 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.34□□□□□ -0.43
PrnpP04925 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.34□□□□□ -0.43
PrnpP04925 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.34□□□□□ -0.43
PrnpP04925 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.34□□□□□ -0.43
PrnpP04925 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.34□□□□□ -0.43
PrnpP04925 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
PrnpP04925 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
PrnpP04925 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.34□□□□□ -0.43
PrnpP04925 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
PrnpP04925 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
PrnpP04925 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrnpP04925 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms